ssr_primer
Primer Details for TRINITY_DN76607_c3_g1_i4 |
|---|
| (ATTTT)4(ATTTTTTTTTTTACATGACCAGGCTAAAATATGCATGGAATGTGTATATTCATTTTAATAGTCAACTTGATTTACTTTGTTTCTGATGTTTATTCTCTGTGGTGAGTCTGATCACTATGATTCCGATTTGAAATAAAACCCCTAAAATCTTGCTCGCAAGTAGGTTTTGAAAATTTTCATTTCGTATATCGCTCTTTTACGTCAAATTTCGATGAGGAAGTATGCCTCATATTTTTTTTCTCATTATTTTACTGTTCAGTGACATTAATACTTTGTTATTTGGATAATGGCAGAAAGAAAGGAACATTTTATCTTGATTAAACTATTTCCTAACTATTAAAAATGACTAATTTTTTGTCGTTGTTTCTGTAGCATGCCGGTGATGTAGAAGAAGCTTACAAATGGTTAGATGAAGCCCAAGGCTTGGATACAGCAGATAGATACATTAATTCGAAGTGTGCGAAGTACATGCTCCGAGCGAATCTAGTGCAGCAAGCAGAGGAAATGTGTTCCAAATTCACGCGCGAAGGTGTTTCCGCAATGGAGAGTCTGAATGAAATGCAGTGTATGTGGTTTCAAACAGAATGTGCCTTGGCCTACCAAAGATTAAAGAAATGGGGAGAAGCCCTGAAAAAATGTCATGAAGTTGATAGGCATTTCACTGAAATTTTTGACGATCAAGTAGACTTTCACACATACTGTATGCGCAAAATGACATTGCGCTCTTATGTTGGTTTATTGCGATTAGAAGACGTTCTACGTTCGCATCCGTTTTACATCCGCGCCGCGATATGTGCCATCTCTGTGTACCTTCATCTGGAAGACAAACCTCTGAACAGCAGTCAAAATGAACATCATCAAAATACAGAGAACCTGACGCCGGTGGAGTACAAGAAGCTGAAGCTGAAGCAGAAGCGGGCGAGGAAGAAGGCCGAGAAGGAGAAGAAGGAGGCGGAGGCAGCGGCGGCGGAGAAGAAGGAGGCGGAGGCCCCGCAGCAGCAGCAGCAGCGCCAGAGGAAGCCCGGCAGACACGCCGCCGCCGACGTCGAGCAGGACGCACCCAAGCTCGAGAAACTCGTCCCCGAGAAACTAGCCAAGGTTGACGATCCTCTGGAACAAGCCATAAAATTTTTAAAACCTCTTCAACTTCTAGCCTCTAACCGTATTGAAACTCACCTAATGGCCTTTGAAATTTACTTTAGAAAAGAAAAGCCATTGATCATGCTCCAAAGTATAAAACGAGCCCACCGTTTGAACCCTAGCGATCCTGCTCTTCATTCTTGCCTCGTACGTTTTCTCCTGTGGCGATCGAACAACAAAGAATCTTTGGATCCTAGCGTGAATGTGGTCATCGATAGCACCCTAAGTCAATTAATTGGTAATGTCACCGATGCACACGAGCTTAATTCACAGTTCCTTCAGAAATATTCAAATTCTCTTCCAGCACTTTTCGAAGGTAGCAAAATGATGTATCTACTAGACTCATCAAGGAAAGAAGAAGCTGTATCTTTAGCCACAAAACTTGATGACAAGCTAGAAGGGATTAGTATACCGCTCTGTACAAAAATAGTGGAATCTTTACAAGAAGGAGTATTCGGAAGCTGTGAAAAAGAGAGCGAGGAATACAAGAAGCTTTGTCACGCACGGTACCCATTAGCTACAGCATTCAAACCAGTCAGCTCTGAAAGCGCTTCGGATAGTAGCATCTCAGAAAGCCAGGGCCAGGGAGCCAGGGTGTTTACGTAATTGATACTTCCCTACCTCACAACTTCATCGATGATAACTGTGGAGGGGTATCAACTGACAACATTGGCGCGATAACGGCTTTAGTCATTGGATAGGAGTCTCGGCATCTCGGAGGAGGGAACTCAGTGGTGTTTTGTGGTGTTGTTATTGTTACCCTGCGAAACTCTCTCACTTTAGTTTAATTTTTACTAATTTAAGAATTGGTTTTTATTACGTATTACTTTCTGTTGGCGACTTTTCGCTAACTATAAAGCTGAACTTTTTTTTATTATTGTTCATTCTTGTTATTGGTAATCGGACTTTTGTGAATTCGTTCCCATGTTCGTTATTCTCTTGTTCAGTTTTTTTTTTTTTTTTTTTATTTATTCAGTAAGTGATAAAAATCATCTTGACAGACCCTTTCAGTTTTTTACCGCATGTCCATGA)(T)14: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCGAATCTAGTGCAGCAAGC | GGTAGGCCAAGGCACATTCT | Start: 1014 |
| Tm | 59.973 | 60.034 | End: 1137 |
| Size | 20 | 20 | 124 |
| Primer 2 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GCTTGCTGCACTAGATTCGC | Start: 898 |
| Tm | 59.964 | 59.973 | End: 1033 |
| Size | 20 | 20 | 136 |
| Primer 3 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GGTAGGCCAAGGCACATTCT | Start: 898 |
| Tm | 59.964 | 60.034 | End: 1137 |
| Size | 20 | 20 | 240 |
| Primer 4 details |
|---|
| Sequence | GAACCCTAGCGATCCTGCTC | TTAAGCTCGTGTGCATCGGT | Start: 1790 |
| Tm | 59.967 | 60.038 | End: 1942 |
| Size | 20 | 20 | 153 |
| Primer 5 details |
|---|
| Sequence | ACGTTTTCTCCTGTGGCGAT | TTAAGCTCGTGTGCATCGGT | Start: 1826 |
| Tm | 59.965 | 60.038 | End: 1942 |
| Size | 20 | 20 | 117 |
(GCA)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCGAATCTAGTGCAGCAAGC | GGTAGGCCAAGGCACATTCT | Start: 1014 |
| Tm | 59.973 | 60.034 | End: 1137 |
| Size | 20 | 20 | 124 |
| Primer 2 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GCTTGCTGCACTAGATTCGC | Start: 898 |
| Tm | 59.964 | 59.973 | End: 1033 |
| Size | 20 | 20 | 136 |
| Primer 3 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GGTAGGCCAAGGCACATTCT | Start: 898 |
| Tm | 59.964 | 60.034 | End: 1137 |
| Size | 20 | 20 | 240 |
| Primer 4 details |
|---|
| Sequence | GAACCCTAGCGATCCTGCTC | TTAAGCTCGTGTGCATCGGT | Start: 1790 |
| Tm | 59.967 | 60.038 | End: 1942 |
| Size | 20 | 20 | 153 |
| Primer 5 details |
|---|
| Sequence | ACGTTTTCTCCTGTGGCGAT | TTAAGCTCGTGTGCATCGGT | Start: 1826 |
| Tm | 59.965 | 60.038 | End: 1942 |
| Size | 20 | 20 | 117 |
(T)19: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCGAATCTAGTGCAGCAAGC | GGTAGGCCAAGGCACATTCT | Start: 1014 |
| Tm | 59.973 | 60.034 | End: 1137 |
| Size | 20 | 20 | 124 |
| Primer 2 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GCTTGCTGCACTAGATTCGC | Start: 898 |
| Tm | 59.964 | 59.973 | End: 1033 |
| Size | 20 | 20 | 136 |
| Primer 3 details |
|---|
| Sequence | TGTTTCTGTAGCATGCCGGT | GGTAGGCCAAGGCACATTCT | Start: 898 |
| Tm | 59.964 | 60.034 | End: 1137 |
| Size | 20 | 20 | 240 |
| Primer 4 details |
|---|
| Sequence | GAACCCTAGCGATCCTGCTC | TTAAGCTCGTGTGCATCGGT | Start: 1790 |
| Tm | 59.967 | 60.038 | End: 1942 |
| Size | 20 | 20 | 153 |
| Primer 5 details |
|---|
| Sequence | ACGTTTTCTCCTGTGGCGAT | TTAAGCTCGTGTGCATCGGT | Start: 1826 |
| Tm | 59.965 | 60.038 | End: 1942 |
| Size | 20 | 20 | 117 |
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